Genomic Characteristics of NDM-Producing Enterobacteriaceae Isolates in Australia and Their bla NDM Genetic Contexts

bla NDM has been reported in differentEnterobacteriaceae species and on numerous plasmid replicon types (Inc). Plasmid replicon typing, in combination with genomic characteristics of the bacterial host (e.g., sequence typing), is used to infer the spread of antimicrobial resistance determinants between genetically unrelated bacterial hosts. The genetic context ofbla NDM is heterogeneous. In this study, we genomically characterized 12 NDM-producingEnterobacteriaceae isolated in Australia between 2012 and 2014:Escherichia coli (n = 6),Klebsiella pneumoniae (n = 3),Enterobacter cloacae (n = 2) andProvidencia rettgeri (n = 1). We describe theirbla NDM genetic contexts within Tn125 , providing insights into the acquisition ofbla NDM intoEnterobacteriaceae . IncFII-type (n = 7) and IncX3 (n = 4) plasmids were the most common plasmid types found. The IncHI1B (n = 1) plasmid was also identified. Five differentbla NDM genetic contexts were identified, indicating four particular plasmids with specificbla NDM genetic contexts (NGCs), three of which were IncFII plasmids (FII-A to -C). Of note, thebla NDM genetic context ofP. rettgeri was not conjugative. Epidemiological links between our NDM-producingEnterobacteriaceae were established by their acquisition of these five particular plasmid types. The combination of different molecular and genetic characterization methods allowed us to provide insight into the spread of plasmids transmittingbla NDM .