ppGpp couples transcription to DNA repair in E. coli
Author(s) -
Venu Kamarthapu,
Vitaly Epshtein,
Bradley Benjamin,
Sergey Proshkin,
А. С. Миронов,
Michael Cashel,
Evgeny Nudler
Publication year - 2016
Publication title -
science
Language(s) - Uncategorized
Resource type - Journals
SCImago Journal Rank - 12.556
H-Index - 1186
eISSN - 1095-9203
pISSN - 0036-8075
DOI - 10.1126/science.aad6945
Subject(s) - stringent response , dna repair , dna , transcription (linguistics) , rna polymerase , biology , dna damage , nucleotide excision repair , microbiology and biotechnology , escherichia coli , genetics , gene , linguistics , philosophy
The small molecule alarmone (p)ppGpp mediates bacterial adaptation to nutrient deprivation by altering the initiation properties of RNA polymerase (RNAP). ppGpp is generated in Escherichia coli by two related enzymes, RelA and SpoT. We show that ppGpp is robustly, but transiently, induced in response to DNA damage and is required for efficient nucleotide excision DNA repair (NER). This explains why relA-spoT-deficient cells are sensitive to diverse genotoxic agents and ultraviolet radiation, whereas ppGpp induction renders them more resistant to such challenges. The mechanism of DNA protection by ppGpp involves promotion of UvrD-mediated RNAP backtracking. By rendering RNAP backtracking-prone, ppGpp couples transcription to DNA repair and prompts transitions between repair and recovery states.
Accelerating Research
Robert Robinson Avenue,
Oxford Science Park, Oxford
OX4 4GP, United Kingdom
Address
John Eccles HouseRobert Robinson Avenue,
Oxford Science Park, Oxford
OX4 4GP, United Kingdom