Open AccessCharacterisation of symbionts of entomopathogenic nematodes by universally primed‐PCR (UP‐PCR) and UP‐PCR product cross‐hybridisation
Author(s) -
Nielsen O.,
Lübeck P.S.
Publication year - 2002
Publication title -
fems microbiology letters
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.899
H-Index - 151
eISSN - 1574-6968
pISSN - 0378-1097
DOI - 10.1111/j.1574-6968.2002.tb11371.x
Subject(s) - photorhabdus , biology , xenorhabdus , nematode , heterorhabditis , microbiology and biotechnology , photorhabdus luminescens , polymerase chain reaction , genetics , gene , ecology
Abstract This work introduces and demonstrates the applicability of universally primed‐PCR (UP‐PCR) for differentiating bacterial symbionts of entomopathogenic nematodes. Furthermore, typing by UP‐PCR product cross‐hybridisation was successfully introduced to cluster the bacterial strains. The work was initiated by isolating 10 isolates of Photorhabdus temperata (S172) from the nematode host Heterorhabditis sp. (DK172) and 12 isolates of Xenorhabdus bovienii (S1) from the nematode Steinernema feltiae (DK1). The isolates were compared by UP‐PCR using different primers. The two bacterial species ( P. temperata and X. bovienii ) could be distinguished on the basis of the banding pattern whereas isolates isolated from the same nematode host had identical banding patterns. Three isolates obtained from DK172 and DK1, respectively, were then selected along with a number of reference strains (Hb, HP88, C1, K122, HSH2, HL81, T228, 61, AN6, Q58) and further characterised by UP‐PCR product cross‐hybridisation. The Xenorhabdus strains (Q58, AN6, 61, T228, S1) represented three species and these species were separated by the hybridisation technique. The Photorhabdus strains (Hb, HP88, C1, K122, HSH2, HL81, S172) represented two species and were also separated according to this in the cross‐hybridisation. Within each species of Photorhabdus , two subgroups were formed as a result of intensity of the hybridisation signals. This grouping was in agreement with previous studies in other laboratories.