Open AccessAnalysis of mutational effects of a polyhydroxybutyrate (PHB) polymerase on bacterial PHB accumulation using an in vivo assay system
Author(s) -
Taguchi Seiichi,
Maehara Akira,
Takase Kazuma,
Nakahara Maki,
Nakamura Hirofumi,
Doi Yoshiharu
Publication year - 2001
Publication title -
fems microbiology letters
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.899
H-Index - 151
eISSN - 1574-6968
pISSN - 0378-1097
DOI - 10.1111/j.1574-6968.2001.tb10620.x
Subject(s) - polyhydroxybutyrate , ralstonia , polymerase , biochemistry , mutant , mutagenesis , polymerase chain reaction , enzyme , escherichia coli , in vivo , chemistry , biology , population , microbiology and biotechnology , bacteria , gene , genetics , demography , sociology
Polymerase is a central enzyme involved in the biosynthesis of polyhydroxybutyrate (PHB), a well‐known bacterial biodegradable polyester. In this study, we have established an in vivo assay system to analyze mutational effects of Ralstonia eutropha polymerase (termed PhbC Re ) on the level of PHB accumulation in recombinant strains of Escherichia coli . This in vitro evolution system consists of a polymerase chain reaction‐mediated random mutagenesis and two assay procedures, a plate assay using a PHB‐staining dye and a high‐pressure liquid chromatographic assay based on the converting reaction from PHB to crotonic acid. The distribution pattern of the PHB accumulation level of the mutant population using 378 clones arbitrarily selected, suggested that the present level of PhbC Re is high and well‐optimized. It is noteworthy that many of the amino acid substitutions affecting the PHB accumulation occurred in the conserved positions or regions within an ‘α/β hydrolase fold’ which is commonly found among hydrolytic enzymes. From a good correlation with the level of PHB accumulation, an activity estimation of the PhbC Re would be efficiently achieved by monitoring the level of PHB accumulation using the in vivo assay system established here.