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The use of workflows in the design and implementation of complex experiments in macromolecular crystallography
Author(s) -
Brockhauser Sandor,
Svensson Olof,
Bowler Matthew W.,
Nanao Max,
Gordon Elspeth,
Leal Ricardo M. F.,
Popov Alexander,
Gerring Matthew,
McCarthy Andrew A.,
Gotz Andy
Publication year - 2012
Publication title -
acta crystallographica section d
Language(s) - English
Resource type - Journals
ISSN - 1399-0047
DOI - 10.1107/s090744491201863x
Subject(s) - beamline , goniometer , detector , computer science , workflow , crystal (programming language) , synchrotron , synchrotron radiation , automation , materials science , optics , computational science , beam (structure) , physics , mechanical engineering , engineering , database , programming language
The automation of beam delivery, sample handling and data analysis, together with increasing photon flux, diminishing focal spot size and the appearance of fast‐readout detectors on synchrotron beamlines, have changed the way that many macromolecular crystallography experiments are planned and executed. Screening for the best diffracting crystal, or even the best diffracting part of a selected crystal, has been enabled by the development of microfocus beams, precise goniometers and fast‐readout detectors that all require rapid feedback from the initial processing of images in order to be effective. All of these advances require the coupling of data feedback to the experimental control system and depend on immediate online data‐analysis results during the experiment. To facilitate this, a Data Analysis WorkBench ( DAWB ) for the flexible creation of complex automated protocols has been developed. Here, example workflows designed and implemented using DAWB are presented for enhanced multi‐step crystal characterizations, experiments involving crystal reorientation with kappa goniometers, crystal‐burning experiments for empirically determining the radiation sensitivity of a crystal system and the application of mesh scans to find the best location of a crystal to obtain the highest diffraction quality. Beamline users interact with the prepared workflows through a specific brick within the beamline‐control GUI MXCuBE .

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