A Tripartite Interaction among the Basidiomycete Rhodotorula mucilaginosa, N2-Fixing Endobacteria, and Rice Improves Plant Nitrogen Nutrition
Author(s) -
Karnelia Paul,
Chinmay Saha,
Mayurakshi Nag,
Drishti Mandal,
Haraprasad Naiya,
Diya Sen,
Souvik Mitra,
Mohit Kumar,
Dipayan Bose,
G. N. Mukherjee,
Nabanita Naskar,
Susanta Lahiri,
Upal Das Ghosh,
Sudipta Tripathi,
Mousumi Poddar Sarkar,
Manidipa Banerjee,
Aleysia Kleinert,
Alex J. Valentine,
Sucheta Tripathy,
Senjuti Sinharoy,
A. Seal
Publication year - 2019
Publication title -
the plant cell
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 5.324
H-Index - 341
eISSN - 1532-298X
pISSN - 1040-4651
DOI - 10.1105/tpc.19.00385
Subject(s) - pseudomonas stutzeri , biology , oryza sativa , diazotroph , oryza , botany , ammonium , nitrogen fixation , biochemistry , gene , chemistry , bacteria , genetics , organic chemistry
Nitrogen (N) limits crop yield, and improvement of N nutrition remains a key goal for crop research; one approach to improve N nutrition is identifying plant-interacting, N 2 -fixing microbes. Rhodotorula mucilaginosa JGTA-S1 is a basidiomycetous yeast endophyte of narrowleaf cattail ( Typha angustifolia ). JGTA-S1 could not convert nitrate or nitrite to ammonium but harbors diazotrophic (N 2 -fixing) endobacteria ( Pseudomonas stutzeri ) that allow JGTA-S1 to fix N 2 and grow in a N-free environment; moreover, P. stutzeri dinitrogen reductase was transcribed in JGTA-S1 even under adequate N. Endobacteria-deficient JGTA-S1 had reduced fitness, which was restored by reintroducing P. stutzeri JGTA-S1 colonizes rice ( Oryza sativa ), significantly improving its growth, N content, and relative N-use efficiency. Endofungal P. stutzeri plays a significant role in increasing the biomass and ammonium content of rice treated with JGTA-S1; also, JGTA-S1 has better N 2 -fixing ability than free-living P. stutzeri and provides fixed N to the plant. Genes involved in N metabolism, N transporters, and NODULE INCEPTION -like transcription factors were upregulated in rice roots within 24 h of JGTA-S1 treatment. In association with rice, JGTA-S1 has a filamentous phase and P. stutzeri only penetrated filamentous JGTA-S1. Together, these results demonstrate an interkingdom interaction that improves rice N nutrition.
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