PPIM: A Protein-Protein Interaction Database for Maize | Zendy

Guanghui Zhu | Zendy; Aibo Wu | Zendy; Xin-Jian Xu | Zendy; Peipei Xiao | Zendy; Le Lü | Zendy; Jingdong Liu | Zendy; Yongwei Cao | Zendy; Luonan Chen | Zendy; Jun Wu | Zendy; XingMing Zhao | Zendy

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PPIM: A Protein-Protein Interaction Database for Maize

Author(s) -

Guanghui Zhu,

Aibo Wu,

Xin-Jian Xu,

Peipei Xiao,

Le Lü,

Jingdong Liu,

Yongwei Cao,

Luonan Chen,

Jun Wu,

XingMing Zhao

Publication year - 2015

Publication title -

plant physiology

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.554

H-Index - 312

eISSN - 1532-2548

pISSN - 0032-0889

DOI - 10.1104/pp.15.01821

Subject(s) - protein–protein interaction , zea mays , database , crop , computer science , resource (disambiguation) , microbiology and biotechnology , computational biology , biology , agronomy , genetics , computer network

Maize (Zea mays) is one of the most important crops worldwide. To understand the biological processes underlying various traits of the crop (e.g. yield and response to stress), a detailed protein-protein interaction (PPI) network is highly demanded. Unfortunately, there are very few such PPIs available in the literature. Therefore, in this work, we present the Protein-Protein Interaction Database for Maize (PPIM), which covers 2,762,560 interactions among 14,000 proteins. The PPIM contains not only accurately predicted PPIs but also those molecular interactions collected from the literature. The database is freely available at http://comp-sysbio.org/ppim with a user-friendly powerful interface. We believe that the PPIM resource can help biologists better understand the maize crop.

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