The International HapMap Project Web site: Figure 1. | Zendy

Guðmundur Á. Þórisson | Zendy; Albert V. Smith | Zendy; Lalitha Krishnan | Zendy; Lincoln Stein | Zendy

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The International HapMap Project Web site: Figure 1.

Author(s) -

Guðmundur Á. Þórisson,

Albert V. Smith,

Lalitha Krishnan,

Lincoln Stein

Publication year - 2005

Publication title -

genome research

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 9.556

H-Index - 297

eISSN - 1549-5469

pISSN - 1088-9051

DOI - 10.1101/gr.4413105

Subject(s) - international hapmap project , haplotype , biology , web site , single nucleotide polymorphism , haplotype estimation , web application , download , genotype , genetics , computational biology , world wide web , computer science , the internet , gene

The HapMap Web site at http://www.hapmap.org is the primary portal to genotype data produced as part of the International Haplotype Map Project. In phase I of the project, >1.1 million SNPs were genotyped in 270 individuals from four worldwide populations. The HapMap Web site provides researchers with a number of tools that allow them to analyze the data as well as download data for local analyses. This paper presents step-by-step guides to using those tools, including guides for retrieving genotype and frequency data, picking tag-SNPs for use in association studies, viewing haplotypes graphically, and examining marker-to-marker LD patterns.

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