Galaxy: A platform for interactive large-scale genome analysis | Zendy

Belinda Giardine | Zendy; Cathy Riemer | Zendy; Ross C. Hardison | Zendy; Richard Burhans | Zendy; Laura Elnitski | Zendy; Prachi Shah | Zendy; Yi Zhang | Zendy; Daniel Blankenberg | Zendy; István Albert | Zendy; James Taylor | Zendy; Webb Miller | Zendy; W. James Kent | Zendy; Anton Nekrutenko | Zendy

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Galaxy: A platform for interactive large-scale genome analysis

Author(s) -

Belinda Giardine,

Cathy Riemer,

Ross C. Hardison,

Richard Burhans,

Laura Elnitski,

Prachi Shah,

Yi Zhang,

Daniel Blankenberg,

István Albert,

James Taylor,

Webb Miller,

W. James Kent,

Anton Nekrutenko

Publication year - 2005

Publication title -

genome research

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 9.556

H-Index - 297

eISSN - 1549-5469

pISSN - 1088-9051

DOI - 10.1101/gr.4086505

Subject(s) - annotation , biology , computer science , genome , galaxy , simple (philosophy) , visualization , computational biology , world wide web , information retrieval , bioinformatics , data mining , astrophysics , genetics , gene , physics , philosophy , epistemology

Accessing and analyzing the exponentially expanding genomic sequence and functional data pose a challenge for biomedical researchers. Here we describe an interactive system, Galaxy, that combines the power of existing genome annotation databases with a simple Web portal to enable users to search remote resources, combine data from independent queries, and visualize the results. The heart of Galaxy is a flexible history system that stores the queries from each user; performs operations such as intersections, unions, and subtractions; and links to other computational tools. Galaxy can be accessed at http://g2.bx.psu.edu.

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