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CLIMB (the Cloud Infrastructure for Microbial Bioinformatics): an online resource for the medical microbiology community
Author(s) -
Thomas R. Connor,
Nicholas J. Loman,
Simon Thompson,
Andy Smith,
Joel Southgate,
Radoslaw Poplawski,
Matthew Bull,
Emily J. Richardson,
Matthew A. Ismail,
Christine Kitchen,
Martyn F. Guest,
Marius Bakke,
Samuel K. Sheppard,
Mark J. Pallen
Publication year - 2016
Publication title -
microbial genomics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 2.476
H-Index - 28
ISSN - 2057-5858
DOI - 10.1099/mgen.0.000086
Subject(s) - cloud computing , exploit , reuse , resource (disambiguation) , genomics , computer science , data science , computational biology , bioinformatics , genome , biology , computer security , gene , genetics , ecology , computer network , operating system
The increasing availability and decreasing cost of high-throughput sequencing has transformed academic medical microbiology, delivering an explosion in available genomes while also driving advances in bioinformatics. However, many microbiologists are unable to exploit the resulting large genomics datasets because they do not have access to relevant computational resources and to an appropriate bioinformatics infrastructure. Here, we present the Cloud Infrastructure for Microbial Bioinformatics (CLIMB) facility, a shared computing infrastructure that has been designed from the ground up to provide an environment where microbiologists can share and reuse methods and data.

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