Zobellella maritima sp. nov., a polycyclic aromatic hydrocarbon-degrading bacterium, isolated from beach sediment
Author(s) -
Dong Wan Lee,
Hanbyul Lee,
Bong-Oh Kwon,
Jong Seong Khim,
Un Hyuk Yim,
Hongjae Park,
Byeonghyeok Park,
InGeol Choi,
Beom Seok Kim,
JaeJin Kim
Publication year - 2018
Publication title -
international journal of systematic and evolutionary microbiology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.925
H-Index - 173
eISSN - 1466-5034
pISSN - 1466-5026
DOI - 10.1099/ijsem.0.002825
Subject(s) - 16s ribosomal rna , biology , strain (injury) , phylogenetic tree , bacteria , genomic dna , oxidase test , microbiology and biotechnology , phosphatidylglycerol , ribosomal rna , botany , gene , genetics , biochemistry , phospholipid , anatomy , membrane , phosphatidylcholine , enzyme
A novel Gram-stain-negative, motile, rod-shaped bacterium, designated strain 102-Py4 T , was isolated from Sinduri beach sediment in Taean, Republic of Korea. Cells were aerobic, oxidase-positive and catalase-positive. The isolate grew optimally with 1-3 % (w/v) NaCl, but NaCl is not an absolute requirement for growth. 16S rRNA gene sequence analysis revealed that strain 102-Py4 T clustered together with Zobellella aerophila and fell within the clade formed by recognized species of the genus Zobellella. Its closest phylogenetic neighbours were Z. aerophila JC2671 T (98.1 % 16S rRNA gene sequence similarity), Zobellella denitrificans ZD1 T (96.4 %) and Zobellella taiwanensis ZT1 T (96.0 %). The major fatty acids were summed feature 3 (comprising C16 : 1ω7c and/or C16 : 1ω6c), C12 : 0, summed feature 8 (comprising C18 : 1ω7c and/or C18 : 1ω6c) and C16 : 0. The polar lipids were phosphatidylethanolamine, phosphatidylglycerol and two unidentified amino lipids. The DNA G+C content was 62.1 mol%. The DNA-DNA relatedness value between strain 102-Py4 T and Z. aerophila JC2671 T was 12.4±1.3 %. The phenotypic properties of 102-Py4 T demonstrated that this strain could be distinguished from other Zobellella species. On the basis of the data presented, strain 102-Py4 T (=KCTC 62272 T =JCM 32359 T =DSM 106043 T ) is considered to represent a novel species of the genus Zobellella, for which the name Zobellella maritima sp. nov. is proposed.
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