Roseovarius ramblicola sp. nov., a moderately halophilic bacterium isolated from saline soil in Spain
Author(s) -
David J. Castro,
Isabel Cerezo,
Inmaculada Sampedro,
Fernando MartínezCheca
Publication year - 2018
Publication title -
international journal of systematic and evolutionary microbiology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.925
H-Index - 173
eISSN - 1466-5034
pISSN - 1466-5026
DOI - 10.1099/ijsem.0.002744
Subject(s) - 16s ribosomal rna , biology , halophile , strain (injury) , phosphatidylglycerol , bacteria , alphaproteobacteria , botany , soil microbiology , glycolipid , ribosomal rna , phylogenetic tree , microbiology and biotechnology , biochemistry , gene , phospholipid , phosphatidylcholine , genetics , membrane , anatomy
Strain D15 T was isolated from a soil sample taken from Rambla Salada (Murcia), south-eastern Spain, by using the dilution-to-extinction method. The strain, a Gram-stain-negative aerobic bacteria, is non-motile, ovoid- or rod-shaped, catalase- and oxidase-positive, and grows at NaCl concentrations within the range 0.5-10 % (w/v) [optimum 3 % (w/v)], at 5-30 °C (optimum 28 °C) and at pH 6-9 (optimum pH 7.0). The 16S rRNA gene sequence indicates that it belongs to the genus Roseovarius in the class Alphaproteobacteria. Its closest relatives are Roseovarius tolerans EL-172 T and Roseovarius azorensis SSW084 T , to which the strain shows 16S rRNA gene-sequence similarity values of 96.1 and 95.3 %, respectively. The DNA G+C content is 63 mol%. The major fatty acids (>5 % of the total fatty acids) of strain D15 T are C18 : 1ω7c, C16 : 0 and C12 : 0. The only detected isoprenoid quinone of strain D15 T is ubiquinone 10 (Q-10). The polar lipid profile contains phosphatidylcholine, phosphatidylethanolamine, phosphatidylglycerol, aminolipid and three polar lipids. Based on the phylogenetic, genotypic, phenotypic and chemotaxonomic data, the strain represents a novel species of the genus Roseovarius, for which the name Roseovarius ramblicola sp. nov. is proposed. Strain D15 T (=CECT 9424=LMG 30322) is the type strain.
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