Kordiimonas pumila sp. nov., isolated from coastal sediment
Author(s) -
Zhao Ju,
Ran Zhang,
Xinjun Hou,
Shuaibo Han,
Yu Li,
Cong Sun,
Min Wu,
Lin Xu
Publication year - 2018
Publication title -
international journal of systematic and evolutionary microbiology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.925
H-Index - 173
eISSN - 1466-5034
pISSN - 1466-5026
DOI - 10.1099/ijsem.0.002740
Subject(s) - 16s ribosomal rna , biology , phylogenetic tree , strain (injury) , glycolipid , phosphatidylglycerol , genomic dna , genus , lineage (genetic) , botany , phylogenetics , gene , genetics , biochemistry , phospholipid , anatomy , membrane , phosphatidylcholine
A novel Gram-stain-negative, translucent-white, aerobic, motile and rod-shaped strain, designated N18 T , was isolated from a coastal sediment sample collected in Zhoushan, Zhejiang Province, China. 16S rRNA gene similarity analysis revealed that strain N18 T demonstrated highest similarity to the genus Kordiimonas(95.3-97.2 %). Phylogenetic analysis of 16S rRNA gene sequence showed that strain N18 T represented a distinct lineage in the clade consisting of the genus Kordiimonas. Strain N18 T was found to grow at 10-37 °C (optimum 28 °C), pH 6.0-8.0 (optimum 7.0) and with 1.0-4.0 % (w/v) NaCl (optimum 2.5 %). The G+C content of the genomic DNA was 55.3 mol%. The major cellular fatty acids were identified as summed feature 3 (comprising iso-C15 : 0 2-OH/C16 : 1ω7c), iso-C17 : 1ω9c and iso-C15 : 0. The polar lipid profile of N18 T consisted of phosphatidylglycerol, phosphatidylethanolamine, diphosphatidylglycerol, an unidentified glycolipid, an unidentified aminoglycolipid, an unidentified aminophospholipid and five unidentified lipids. The respiratory quinone was Q-10. Based on chemotaxonomic, morphological and physiological properties, strain N18 T could be distinguished from its closest phylogenetic neighbours. Thus, we propose Kordiimonas pumila sp. nov., the type strain is N18 T (=MCCC 1K03436 T =KCTC 62164 T ).
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