Flavobacterium cyanobacteriorum sp. nov., isolated from cyanobacterial aggregates in a eutrophic lake
Author(s) -
Haiyuan Cai,
Yonghui Zeng,
Yanan Wang,
HengLin Cui,
Helong Jiang
Publication year - 2018
Publication title -
international journal of systematic and evolutionary microbiology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.925
H-Index - 173
eISSN - 1466-5034
pISSN - 1466-5026
DOI - 10.1099/ijsem.0.002664
Subject(s) - biology , 16s ribosomal rna , flavobacterium , phylogenetic tree , flavobacteriaceae , strain (injury) , microbiology and biotechnology , genomic dna , bacteria , genome size , chemotaxonomy , phylogenetics , genome , ribosomal rna , botany , gene , taxonomy (biology) , genetics , pseudomonas , bacteroidetes , anatomy
A Gram-reaction-negative, aerobic, non-flagellated, non-gliding, rod-shaped and yellow-pigmented bacterium, designated strain TH021 T , was isolated from cyanobacterial aggregates in a eutrophic lake, Taihu Lake, China. Optimal growth occurred at pH 7.0 (range: 5.0-10.0), 28 °C (range, 4-32 °C) and 0 % (w/v) NaCl (range, 0-1.0 %) in Reasoner's 2A broth. No growth was observed at 37 °C. The cells were found to be positive for oxidase and catalase activities. The major respiratory quinone was menaquinone-6. The major fatty acids (>10 %) were identified as iso-C15 : 0 and C16 : 1ω7c/C16 : 1ω6c. The major polar lipid was phosphatidylethanolamine. Phylogenetic analysis based on 16S rRNA gene sequences revealed that the isolate was affiliated with the genus Flavobacterium, with the highest sequence similarity found to Flavobacterium hauense BX12 T (94.92 %), followed by Flavobacterium suzhouense XIN-1 T (94.85 %), Flavobacterium arcticum SM1502 T (94.79 %) and Flavobacterium beibuense F44-8 T (94.30 %). The genomic G+C content of strain TH021 T was 41.9 mol% based on total genome calculations. Average nucleotide identities and digital DNA-DNA hybridizations values for complete genomes ranged from 69.4 to 72.8 and 18.0 to 23.8 % between strain TH021 T and strains within the genus Flavobacterium. The phenotypic, chemotaxonomic and phylogenetic properties, and genome analysis suggested that strain TH021 T represents a novel species within the genus Flavobacterium, for which the name Flavobacterium cyanobacteriorum sp. nov. is proposed. The type strain is TH021 T (=LMG 29720 T =CGMCC 1.16325 T ).
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