Halorubrum aethiopicum sp. nov., an extremely halophilic archaeon isolated from commercial rock salt
Author(s) -
Ashagrie Gibtan,
Hye Seon Song,
Joon Yong Kim,
Yeon Bee Kim,
Nakyeong Park,
Kyounghee Park,
Sang-Jae Lee,
Joseph SangIl Kwon,
Seong Woon Roh,
HanSeung Lee
Publication year - 2017
Publication title -
international journal of systematic and evolutionary microbiology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.925
H-Index - 173
eISSN - 1466-5034
pISSN - 1466-5026
DOI - 10.1099/ijsem.0.002525
Subject(s) - halophile , biology , salt (chemistry) , microbiology and biotechnology , bacteria , paleontology , chemistry
A novel extremely halophilic archaeon, designated SAH-A6 T , was isolated from a sample of commercial rock salt in Ethiopia. Cells of SAH-A6 T were aerobic and pleomorphic. The strain was able to grow at concentrations of 15-30 % (w/v) NaCl (optimum 20-25 % NaCl), at pH 6.0-9.0 (optimum pH 7.0) and in a temperature range of 30-55 °C (optimum 37-45 °C). Mg 2+ was not required for growth of SAH-A6 T cells. On the basis of 16S rRNA gene sequence analysis, strain SAH-A6 T was closely related to Halorubrum halodurans Cb34 T (99.1 %), Halorubrum rubrum YC87 T (98.9 %), Halorubrum aquaticum EN-2 T (98.7 %), Halorubrum cibi JCM 15757 T (98.4 %), Halorubrum luteum CGSA15 T (97.3 %), Halorubrum lipolyticum 9-3 T (97.1 %), Halorubrum tibetense 8W8 T (97.1 %), Halorubrum kocurii JCM 1478 T (97.1 %), Halorubrum halophilum B8 T (97.0 %) and Halorubrum persicum C49 T (97.0 %). Phylogenetic analysis based on the rpoB' gene sequences showed that strain SAH-A6 T was closely related to Hrr. halodurans Cb34 T (99.7 %), Hrr. aquaticum JCM 14031 T (99.3 %) and other members of the genus Halorubrum (<99.0 %). The DNA G+C content of the strain was 68.0 mol%. DNA-DNA hybridization between strain SAH-A6 T and the most closely related members of the genus Halorubrum were below 55 %, suggesting that the new isolate constitutes a different genospecies. On the bases of chemotaxonomic, phenotypic and genotypic data, strain SAH-A6 T (=KCCM 43215 T =JCM 31519 T ) represents a novel species of the genus Halorubrum, for which the name Halorubrumaethiopicum sp. nov. is proposed.
Accelerating Research
Robert Robinson Avenue,
Oxford Science Park, Oxford
OX4 4GP, United Kingdom
Address
John Eccles HouseRobert Robinson Avenue,
Oxford Science Park, Oxford
OX4 4GP, United Kingdom