Ramlibacter alkalitolerans sp. nov., alkali-tolerant bacterium isolated from soil of ginseng
Author(s) -
Do-Hoon Lee,
ChangJun Cha
Publication year - 2017
Publication title -
international journal of systematic and evolutionary microbiology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.925
H-Index - 173
eISSN - 1466-5034
pISSN - 1466-5026
DOI - 10.1099/ijsem.0.002342
Subject(s) - biology , ginseng , bacteria , botany , microbiology and biotechnology , genetics , medicine , alternative medicine , pathology
A novel bacterial strain, designated CJ661 T , was isolated from soil of ginseng in Anseong, South Korea. Cells of strain CJ661 T were white-coloured, Gram-staining-negative, non-motile, aerobic and rod-shaped. Strain CJ661 T grew optimally at 30 °C and pH 7.0. The analysis of 16S rRNA gene sequence of strain CJ661 T showed that it belongs to the genus Ramlibacter within the family Comamonadaceae and was most closely related to Ramlibacter ginsenosidimutans KCTC 22276 T (98.1 %), followed by Ramlibacter henchirensis DSM 14656 T (97.1 %). DNA-DNA relatedness levels of strain CJ661 T were 40.6 % to R. ginsenosidimutans KCTC 22276 T and 25.0 % to R. henchirensis DSM 14656 T . The major isoprenoid quinone was ubiquinone (Q-8). The predominant polar lipids were phosphatidylethanolamine, diphosphatidylglycerol and phosphatidylglycerol. The major cellular fatty acids of strain CJ661 T were summed feature 3 (C16 : 1 ω6c and/or C16 : 1 ω7c), C16 : 0 and summed feature 8 (C18 : 1 ω7c and/or C18 : 1 ω6c). The G+C content of the genomic DNA was 65.4 mol%. On the basis polyphasic taxonomic data, strain CJ661 T represents a novel species in the genus Ramlibacter, for which name Ramlibacter alkalitolerans sp. nov. is proposed; the type strain is CJ661 T (=KACC 19305 T =JCM 32081 T ).
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