Nocardioides litorisoli sp. nov., isolated from lakeside soil
Author(s) -
Yu Wang,
Ding Xu,
Anna Luo,
Gejiao Wang,
Shixue Zheng
Publication year - 2017
Publication title -
international journal of systematic and evolutionary microbiology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.925
H-Index - 173
eISSN - 1466-5034
pISSN - 1466-5026
DOI - 10.1099/ijsem.0.002283
Subject(s) - biology , 16s ribosomal rna , peptidoglycan , strain (injury) , microbiology and biotechnology , diamino acid , actinomycetales , phylogenetic tree , glycolipid , genomic dna , diaminopimelic acid , bacteria , ribosomal rna , gene , biochemistry , genetics , gene sequence , streptomyces , anatomy
A Gram-stain-positive, rod-shaped, non-spore-forming bacterium, designated as x-2 T , was isolated from lakeside soil of Sayram in the Xinjiang Uygur Autonomous Region, PR China. On the basis of 16S rRNA gene sequences, strain x-2 T belongs to the genus Nocardioides in the family Nocardioidaceae, being most closely related to Nocardioides panacisoli Gsoil 346 T (97.36 % 16S rRNA gene sequence similarity). Strain x-2 T was characterized chemotaxonomically and found to have ll-diaminopimelic acid in the cell-wall peptidoglycan, phosphatidylglycerol, diphosphatidylglycerol, glycolipids and another three unknown phospholipids as the major polar lipids, MK-8(H4) as the predominant menaquinone and C18 : 1ω9c, iso-C16 : 0, C17 : 1ω8c and C16 : 0 as the major fatty acids. The genomic DNA G+C content of the novel strain was 71.1 mol%. The level of DNA-DNA relatedness between strain x-2 T and N. panacisoli KCTC 19470 T (=Gsoil 346 T ) was 29.8 %. These chemotaxonomic characters support the position of strain x-2 T within the genus Nocardioides. The results of physiological and biochemical tests, as well as phylogenetic analysis, suggest that strain x-2 T represents a novel species of the genus Nocardioides, for which the name Nocardioides litorisoli sp. nov. is proposed. The type strain is x-2 T (=KCTC 39845 T =CCTCCAB 2016255 T ).
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