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Oryzisolibacter propanilivorax gen. nov., sp. nov., a propanil-degrading bacterium
Author(s) -
Ivone VazMoreira,
Carlos NarcisodaRocha,
Ana R. Lopes,
Gilda Carvalho,
Alexandre LobodaCunha,
William B. Whitman,
Cindy Snauwaert,
Peter Vandamme,
Célia M. Manaia,
Olga C. Nunes
Publication year - 2017
Publication title -
international journal of systematic and evolutionary microbiology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.925
H-Index - 173
eISSN - 1466-5034
pISSN - 1466-5026
DOI - 10.1099/ijsem.0.002184
Subject(s) - biology , 16s ribosomal rna , phylogenetic tree , strain (injury) , microbiology and biotechnology , genomic dna , bacteria , ribosomal rna , phylogenetics , botany , gene , genetics , anatomy
Strain EPL6 T , a Gram-negative, motile, short rod was isolated from a propanil and 3,4-dichloroaniline enrichment culture produced from rice paddy soil. Based on the analyses of the 16S rRNA gene sequence, strain EPL6 T was observed to be a member of the family Comamonadaceae, sharing the highest pairwise identity with type strains of the species Alicycliphilus denitrificans K601 T (96.8 %) and Melaminivora alkalimesophila CY1 T (96.8 %). Strain EPL6 T was able to grow in a temperature range of 15-37 °C, pH 6-9 and in the presence of up to 4 % (w/v) NaCl and tested positive for catalase and oxidase reactions. The major respiratory quinone was Q8. The genomic DNA had a G+C content of 69.4±0.9 mol%. The major polar lipids were phosphatidylethanolamine, phosphatidylglycerol and diphosphatidylglycerol, and the major fatty acid methyl esters comprised C16 : 0, C18 : 1ω7c and summed feature 3 (C16 : 1ω7c/iso-C15 : 0 2-OH). Comparison of the genome sequence of strain EPL6 T and of its closest neighbours, Melaminivora alkalimesophila CY1 T and Alicycliphilus denitrificans K601 T , yielded values of ANI ≤84.1 % and of AAI ≤80.3 %. Therefore, the genetic, phylogenetic, phenotypic and chemotaxonomic characteristics support the classification of this organism into a new taxon. Considering the genetic divergence of strain EPL6 T from the type strains of the closest species, which belong to distinct genera, we propose a new genus within the family Comamonadaceae, named Oryzisolibacter propanilivorax gen. nov., sp. nov., represented by the isolate EPL6 T as the type strain of the species (=LMG 28427 T =CECT 8927 T ).

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