Flavobacterium lacunae sp. nov., isolated from a freshwater pond
Author(s) -
Wen-Ming Chen,
Ching-Ling Su,
ShihYi Sheu
Publication year - 2017
Publication title -
international journal of systematic and evolutionary microbiology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.925
H-Index - 173
eISSN - 1466-5034
pISSN - 1466-5026
DOI - 10.1099/ijsem.0.001693
Subject(s) - 16s ribosomal rna , biology , flavobacterium , phylogenetic tree , strain (injury) , microbiology and biotechnology , genomic dna , phylogenetics , genus , gene , bacteria , botany , genetics , pseudomonas , anatomy
A novel bacterial strain AHQ-46 T was isolated from a freshwater lake in Taiwan. The strain was Gram-stain-negative, strictly aerobic, motile by gliding, rod-shaped and formed translucent yellow colonies. Optimal growth occurred at 20-25 °C, pH 7.0, and in the absence of NaCl. Phylogenetic analyses based on 16S rRNA gene sequences showed that strain AHQ-46 T belonged to the genus Flavobacterium and was most closely related to Flavobacterium verecundum TTM-46 T with a sequence similarity of 95.8 %. Strain AHQ-46 T contained iso-C15 : 1 G, iso-C15 : 0, summed feature 3 (C16 : 1ω6c and/or C16 : 1ω7c) and iso-C17 : 0 3-OH as the predominant fatty acids. The polar lipid profile consisted of phosphatidylethanolamine and several uncharacterized aminophospholipids and phospholipids. The major polyamine was homospermidine. The major isoprenoid quinone was MK-6. The DNA G+C content of the genomic DNA was 32.1 mol%. Differential phenotypic properties, together with the phylogenetic inference, demonstrate that strain AHQ-46 T should be classified as a representative of a novel species of the genus Flavobacterium, for which the name Flavobacterium lacunae sp. nov. is proposed. The type strain is AHQ-46 T (=BCRC 80889 T =LMG 28710 T ).
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