Flavobacterium gilvum sp. nov., isolated from stream water
Author(s) -
Su-Kyoung Shin,
Yongheon Ha,
YongJoon Cho,
Soon-Sung Kwon,
Dongeun Yong,
Hana Yi
Publication year - 2016
Publication title -
international journal of systematic and evolutionary microbiology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.925
H-Index - 173
eISSN - 1466-5034
pISSN - 1466-5026
DOI - 10.1099/ijsem.0.001594
Subject(s) - biology , flavobacterium , microbiology and biotechnology , zoology , bacteria , genetics , pseudomonas
A cream-coloured, non-gliding, aerobic Flavobacterium strain, designated EM1308 T , was isolated from stream water. 16S rRNA gene sequence analysis indicated that this isolate is closely related to Flavobacterium glycines NBRC 105008 T (97.3 % similarity) and Flavobacterium piscis CCUG 60099 T (97.2 %). To evaluate the genomic relatedness of the isolate with its neighbours, the whole genome sequences of strain EM1308 T and the type strains of F. glycines and F. piscis were determined. Average nucleotide identities revealed that strain EM1308 T is independent from other Flavobacterium species. The properties of major cellular fatty acids, polar lipids, menaquinone and DNA G+C content of the isolate were within the general range for the genus Flavobacterium , but many biochemical and physiological characteristics distinguished the isolate from previously known species. Thus, strain EM1308 T represents a novel species of the genus Flavobacterium , for which the name Flavobacterium gilvum sp. nov. is proposed. The type strain is EM1308 T (=KACC 18113 T =JCM 30144 T ).
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