Haloparvum alkalitolerans sp. nov., alkali-tolerant haloarchaeon isolated from commercial salt
Author(s) -
Yusuke Kondo,
Hiroaki Minegishi,
Akinobu Echigo,
Yasuhiro Shimane,
Masahiro Kamekura,
Takashi Itoh,
Moriya Ohkuma,
Akira Tanaka,
Naoko Takahashi,
Yasumasa Fukushima,
Yasuhiko Yoshida,
Kunio Ihara,
Ron Usami
Publication year - 2016
Publication title -
international journal of systematic and evolutionary microbiology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.925
H-Index - 173
eISSN - 1466-5034
pISSN - 1466-5026
DOI - 10.1099/ijsem.0.001513
Subject(s) - phosphatidylglycerol , biology , 16s ribosomal rna , halophile , haloarchaea , strain (injury) , phylogenetic tree , microbiology and biotechnology , gene , bacteria , biochemistry , phospholipid , genetics , anatomy , membrane , phosphatidylcholine
A Gram-stain-negative, rod-pleomorphic, aerobic, halophilic archaeon, strain MK62-1T, was isolated from commercial salt made from seawater in the Philippines. Strain MK62-1T was able to grow at 2.1-4.7 M NaCl (with optimum at 2.1-2.6 M NaCl), pH 6.5-9.5 (optimum, pH 7.0-7.5) and 20-55 °C (optimum, 45-50 °C). Based on the orthologous 16S rRNA gene sequence, the closest relative was Haloparvum sedimenti JCM 30891T with 99.2 % similarity. The RNA polymerase subunit B' gene sequence also showed the highest similarity (97.4 %) to that of Haloparvum sedimenti DYS4T. The DNA G+C content of MK62-1T was 70.1 mol%, while that of Haloparvum sedimenti JCM 30891T was 69.5 mol% by the HPLC method. The levels of DNA-DNA relatedness between MK62-1T and Haloparvum sedimenti JCM 30891T were 60.6 and 60.8 % (reciprocally). The major polar lipids of the isolate were C20C20 archaeol derivatives of phosphatidylglycerol, phosphatidylglycerol phosphate methyl ester and phosphatidylglycerol sulfate. Based on the phenotypic and phylogenetic analyses, it is proposed that the isolate represents species within the genus Haloparvum, for which the name Haloparvum alkalitolerans sp. nov. is proposed. The type strain is MK62-1T (=JCM 30442T =KCTC 4214T).
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