Dermabacter jinjuensis sp. nov., a novel species of the genus Dermabacter isolated from a clinical specimen
Author(s) -
Young Kyoung Park,
Kyeong Min Lee,
WooKon Lee,
Myung-Je Cho,
Hye Soo Lee,
YongGon Cho,
Yoo Chul Lee,
Won Kil Lee,
Won Keun Seong,
Kyu Jam Hwang
Publication year - 2016
Publication title -
international journal of systematic and evolutionary microbiology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.925
H-Index - 173
eISSN - 1466-5034
pISSN - 1466-5026
DOI - 10.1099/ijsem.0.001092
Subject(s) - biology , 16s ribosomal rna , strain (injury) , glycolipid , microbiology and biotechnology , phylogenetic tree , genotype , bacteria , genus , ribosomal rna , gene , botany , genetics , biochemistry , anatomy
A Gram-stain-positive, catalase-positive, facultatively anaerobic, non-motile, coryneform bacterium, designated strain 32 T , was isolated from a closed pus sample from a patient having finger necrosis in Korea. Strain 32 T was considered as representing a novel species according to its initial identification by matrix-assisted laser desorption/ionization-time-of-flight MS. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain 32 T belonged to the genus Dermabacter and was closely related to Dermabacter hominis DSM 7083 T (=ATCC 49369 T ) (98.34 % similarity). Optimal growth was observed at 30-40 °C and pH 7. Growth occurred in the presence of 0-6 % (w/v) NaCl. Menaquinones MK-8, MK-7 and MK-9 were the major respiratory quinones. The major polar lipids were phosphatidylethanolamine, phosphatidylcholine, glycolipid and two unknown lipids. The major cellular fatty acids were anteiso-C17 : 0, anteiso-C15 : 0, iso-C16 : 0 and iso-C15 : 0. The DNA G+C content of strain 32 T was 62.58 mol%, and the mean level of DNA-DNA relatedness between strain 32 T and D. hominis ATCC 49369 T was 49±1.6 %. Based on the phenotypic and genotypic characteristics, strain 32 T is confirmed to represent a novel species of the genus Dermabacter, for which the name Dermabacter jinjuensis sp. nov. is proposed. The type strain is 32 T (=NCCP 16133 T =DSM 101003 T ).
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