Streptomyces daqingensis sp. nov., isolated from saline–alkaline soil
Author(s) -
Tong Pan,
Hairong He,
Chuang Li,
Junwei Zhao,
Yuejing Zhang,
Jiansong Li,
Xiangjing Wang,
Chongxi Liu,
Ji Zhang,
Wensheng Xiang
Publication year - 2016
Publication title -
international journal of systematic and evolutionary microbiology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.925
H-Index - 173
eISSN - 1466-5034
pISSN - 1466-5026
DOI - 10.1099/ijsem.0.000887
Subject(s) - biology , actinobacteria , 16s ribosomal rna , streptomyces , strain (injury) , diamino acid , peptidoglycan , phylogenetic tree , actinomycetales , diaminopimelic acid , streptomycetaceae , botany , microbiology and biotechnology , cell wall , bacteria , biochemistry , genetics , gene , anatomy , gene sequence
A novel strain of actinobacteria, designated strain NEAU-ZJC8 T , was isolated from a saline-alkaline soil collected from Heilongjiang Province, north-east China and characterized using a polyphasic approach. Strain NEAU-ZJC8 T exhibited morphological, cultural and chemotaxonomic features consistent with its classification as representing a member of the genus Streptomyces . Growth occurred at 16-35 °C, pH 5.0-11.0 and in the presence of 0-11 % (w/v) NaCl. The cell-wall peptidoglycan contained ll-diaminopimelic acid and glycine. Whole-cell hydrolysates mainly contained glucose, galactose and ribose. Predominant menaquinones were MK-9(H 6 ), MK-9(H 4 ) and MK-9(H 8 ). The polar lipids were diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylinositol, phosphatidylinositol mannoside and two unidentified phospholipids. The major cellular fatty acids (>10 %) were iso-C 16 : 0 , iso-C 15 : 0 , anteiso-C 17 : 0 and C 16 : 0 . The G+C content of the DNA was 72.7 mol%. A phylogenetic tree based on 16S rRNA sequences showed that strain NEAU-ZJC8 T formed a distinct clade within the genus Streptomyces and was closely related to Streptomyces haliclonae DSM 41970 T (98.56 % similarity) and Streptomyces marinus NBRC 105047 T (97.96 % similarity). A combination of DNA-DNA hybridization results and some phenotypic characteristics demonstrated that strain NEAU-ZJC8 T could be distinguished from its closest phylogenetic relatives. Therefore, strain NEAU-ZJC8 T represents a novel species of the genus Streptomyces , for which the name Streptomyces daqingensis sp. nov. is proposed. The type strain is NEAU-ZJC8 T ( = CGMCC 4.7178 T = JCM 30057 T ).
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