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Ideonella paludis sp. nov., isolated from a marsh
Author(s) -
ShihYi Sheu,
Zih-Han Chen,
ChiuChung Young,
WenMing Chen
Publication year - 2015
Publication title -
international journal of systematic and evolutionary microbiology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.925
H-Index - 173
eISSN - 1466-5034
pISSN - 1466-5026
DOI - 10.1099/ijsem.0.000832
Subject(s) - biology , marsh , ecology , zoology , wetland
A bacterial strain, designated KBP-31 T , was isolated from a water sample taken from the Banping Lake Wetland Park in Taiwan and characterized using a polyphasic taxonomic approach. Cells of strain KBP-31 T were Gram-stain-negative, strictly aerobic, motile, light-yellow rods. Growth occurred at 10-37 °C (optimum 25 °C), at pH 6-8 (optimum pH 6) and with 0-1 % NaCl (w/v, optimum 0 %). Phylogenetic analyses based on 16S rRNA gene sequences showed that strain KBP-31 T belonged to the genus Ideonella and was most closely related to Ideonella dechloratans ATCC 51718 T with a sequence similarity of 98.2 %. Strain KBP-31 T contained summed feature 3 (comprising C 16 : 1 ω7 c and/or C 16 : 1 ω6 c ) and C 16 : 0 as the predominant fatty acids. The major hydroxyl fatty acid was C 10 : 0 3-OH. The polar lipid profile consisted of phosphatidylethanolamine, phosphatidylglycerol, diphosphatidylglycerol, an uncharacterized aminophospholipid and two uncharacterized phospholipids. The DNA G+C content of the genomic DNA was 67.9 mol%. The DNA-DNA relatedness of strain KBP-31 T with respect to recognized species of the genus Ideonella was less than 70 %. On the basis of the phylogenetic inference and phenotypic data, strain KBP-31 T should be classified as a novel species, for which the name Ideonella paludis sp. nov. is proposed. The type strain is KBP-31 T ( = BCRC 80524 T  = KCTC 32238 T ).

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