Luteimonas notoginsengisoli sp. nov., isolated from rhizosphere
Author(s) -
Juan Cheng,
Meng-Yue Zhang,
Wei-Xun Wang,
Deene Manikprabhu,
Nimaichand Salam,
Tianyuan Zhang,
YingYing Wu,
WenJun Li,
Yi-Xuan Zhang
Publication year - 2015
Publication title -
international journal of systematic and evolutionary microbiology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.925
H-Index - 173
eISSN - 1466-5034
pISSN - 1466-5026
DOI - 10.1099/ijsem.0.000816
Subject(s) - biology , 16s ribosomal rna , rhizosphere , strain (injury) , genomic dna , phosphatidylglycerol , panax notoginseng , botany , gene , bacteria , microbiology and biotechnology , biochemistry , genetics , phospholipid , anatomy , medicine , alternative medicine , pathology , membrane , phosphatidylcholine
A Gram-staining-negative, yellow-pigmented strain, designated SYP-B804 T , was isolated from the rhizosphere of Panax notoginseng . The strain was rod-shaped with a single polar flagellum. The optimum temperature and pH required for growth of the strain were 28-32 °C and pH 7-8, respectively. 16S rRNA gene sequence analysis indicated that strain SYP-B804 T showed highest 16S rRNA gene sequence similarity with Luteimonas mephitis DSM 12574 T (98.0 %). However, the DNA-DNA relatedness value between them (38.1 ± 0.6 %) was less than the threshold value for the delineation of genomic species. Ubiquinone-8 (Q-8) was the predominant quinone. The major fatty acids were iso-C 15 : 0 and iso-C 17 : 1 ω9 c . The major polar lipids of the strain were diphosphatidylglycerol, phosphatidylglycerol and phosphatidylethanolamine. The G+C content of the genomic DNA was 71 %. On the basis of phenotypic, chemotaxonomic and molecular characteristics, strain SYP-B804 T merits recognition as a representative of a novel species of the genus Luteimonas , for which the name Luteimonas notoginsengisoli sp. nov. is proposed, with SYP-B804 T ( = KCTC 42211 T = JCM 30329 T ) as the type strain.
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