Chryseobacterium frigidum sp. nov., isolated from high-Arctic tundra soil, and emended descriptions of Chryseobacterium bernardetii and Chryseobacterium taklimakanense
Author(s) -
TongRyul Kim,
Myongchol Kim,
OkChol Kang,
Fan Jiang,
Xulu Chang,
Ping Liu,
Yumin Zhang,
Xuyang Da,
Congyi Zheng,
Chengxiang Fang,
Fang Peng
Publication year - 2015
Publication title -
international journal of systematic and evolutionary microbiology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.925
H-Index - 173
eISSN - 1466-5034
pISSN - 1466-5026
DOI - 10.1099/ijsem.0.000761
Subject(s) - chryseobacterium , biology , 16s ribosomal rna , tundra , phylogenetic tree , microbiology and biotechnology , flavobacteriaceae , strain (injury) , botany , bacteria , bacteroidetes , arctic , ecology , gene , genetics , anatomy
A yellow, Gram-reaction-negative, non-motile, aerobic bacterium, designated D07 T , was isolated from a tundra soil near Ny-Ålesund, Svalbard archipelago, Norway (78° N). Growth occurred at 4-37 °C (optimum 28-30 °C) and at pH 6.0-9.0 (optimum pH 7.0-8.0). The strain produced flexirubin-type pigments. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain D07 T belonged to the genus Chryseobacterium in the family Flavobacteriaceae . The 16S rRNA gene sequence of this strain showed 93.83 and 93.31 % sequence similarity, respectively, to those of Chryseobacterium contaminans C26 T and Chryseobacterium taklimakanense X-65 T . Strain D07 T contained anteiso-C 15 : 0 (25.91 %), iso-C 15 : 0 (16.05 %), iso-C 16 : 0 3-OH (9.64 %), iso-C 16 : 0 (9.42 %) and iso-C 14 : 0 (7.36 %) as the predominant cellular fatty acids, MK-6 as the major respiratory quinone and phosphatidylethanolamine, five unknown aminolipids and three unknown lipids as the main polar lipids. The DNA G+C content was 49.3 mol%. On the basis of phenotypic, chemotaxonomic and phylogenetic data, strain D07 T is considered to represent a novel species of the genus Chryseobacterium , for which the name Chryseobacterium frigidum sp. nov. is proposed. The type strain is D07 T ( = CCTCC AB 2011160 T = KCTC 42897 T ). Emended descriptions of Chryseobacterium bernardetii and Chryseobacterium taklimakanense are also provided.
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