Jannaschia pohangensis sp. nov., isolated from seashore sand in Korea
Author(s) -
ByungYong Kim,
Sun-Ho Yoo,
Hang-Yeon Weon,
YoungAh Jeon,
Seungbum Hong,
S.-J. Go,
Erko Stackebrandt,
S.-W. Kwon
Publication year - 2008
Publication title -
international journal of systematic and evolutionary microbiology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.925
H-Index - 173
eISSN - 1466-5034
pISSN - 1466-5026
DOI - 10.1099/ijs.0.65167-0
Subject(s) - biology , 16s ribosomal rna , phylogenetic tree , strain (injury) , genus , bacteria , ribosomal rna , botany , sequence analysis , flagellum , terpenoid , phylogenetics , microbiology and biotechnology , gene , genetics , anatomy
A Gram-negative, aerobic bacterium, H1-M8(T), was isolated from seashore sand in Korea and then characterized using a polyphasic approach. Cells were short rods (0.7-1.0 x 1.5-2.0 microm) and were motile (each cell having at least one flagellum). Colonies were light-brown, non-pigmented, circular and convex with clear margins. Growth of the strain was observed at 5-35 degrees C, pH 6.0-9.0 and NaCl concentrations up to 8.4 % (w/v). Phylogenetic analysis of the 16S rRNA gene sequence revealed a clear affiliation between the novel strain and members of the genus Jannaschia. The sequence similarities between H1-M8(T) and type strains of the genus Jannaschia ranged from 97.0 to 97.8 %. However, DNA-DNA hybridizations between the isolate and type strains of other related species produced low values (21-38 %). The major isoprenoid quinone was Q-10 and the predominant cellular fatty acids were 18 : 1omega7c (68.2 %) and 18 : 0 (10.5 %). The G+C content of the DNA was 63.6 mol%. On the basis of physiological, biochemical and chemotaxonomic traits and data from the comparative 16S rRNA sequence analysis, strain H1-M8(T) represents a novel species of the genus Jannaschia, for which the name Jannaschia pohangensis sp. nov. is proposed. The type strain is H1-M8(T) (=KACC 11609(T) =DSM 19073(T)).
Accelerating Research
Robert Robinson Avenue,
Oxford Science Park, Oxford
OX4 4GP, United Kingdom
Address
John Eccles HouseRobert Robinson Avenue,
Oxford Science Park, Oxford
OX4 4GP, United Kingdom