Parasegetibacter terrae sp. nov., isolated from paddy soil and emended description of the genus Parasegetibacter
Author(s) -
SooJin Kim,
Jae-Hyung Ahn,
Hang-Yeon Weon,
SeungBeom Hong,
SoonJa Seok,
Soon-Wo Kwon
Publication year - 2014
Publication title -
international journal of systematic and evolutionary microbiology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.925
H-Index - 173
eISSN - 1466-5034
pISSN - 1466-5026
DOI - 10.1099/ijs.0.068692-0
Subject(s) - 16s ribosomal rna , biology , strain (injury) , phylogenetic tree , gene sequence , genus , bacteria , microbiology and biotechnology , ribosomal rna , botany , gene , genetics , anatomy
A Gram-stain-negative, variably shaped, non-flagellated, yellow-pigmented, aerobic bacterium, designated strain SGM2-10(T), was isolated from a paddy soil sample from the Suwon region, South Korea. Phylogenetic analysis based on 16S rRNA gene sequences indicated that the isolate was related most closely to Parasegetibacter luojiensis RHYL-37(T). Strain SGM2-10(T) showed highest 16S rRNA gene sequence similarity to P. luojiensis RHYL-37(T) (95.1 %), Flavitalea populi HY-50R(T) (95.0 %) and Flavitalea gansuensis JCN-23(T) (94.4 %). No other species in the family Chitinophagaceae shared more than 94.1 % 16S rRNA gene sequence similarity with strain SGM2-10(T). The major fatty acids of strain SGM2-10(T) were iso-C15 : 0, iso-C15 : 1 G and iso-C17 : 0 3-OH. The only menaquinone was MK-7. The polar lipids comprised phosphatidylethanolamine, seven unknown lipids and ten unknown aminolipids. The G+C content of the DNA of strain SGM2-10(T) was 46.7 mol%. On the basis of the results of the polyphasic characterization presented in this study, it is concluded that strain SGM2-10(T) represents a novel species of the genus Parasegetibacter, for which the name Parasegetibacter terrae sp. nov. is proposed. The type strain is SGM2-10(T) ( = KACC 17341(T) = JCM 19942(T)). The description of the genus Parasegetibacter has also been emended.
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