Nonomuraea rhizophila sp. nov., an actinomycete isolated from rhizosphere soil
Author(s) -
GuoZhen Zhao,
Jie Li,
Hai-Yu Huang,
WenYong Zhu,
Lihua Xu,
WenJun Li
Publication year - 2010
Publication title -
international journal of systematic and evolutionary microbiology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.925
H-Index - 173
eISSN - 1466-5034
pISSN - 1466-5026
DOI - 10.1099/ijs.0.028050-0
Subject(s) - biology , rhizosphere , botany , 16s ribosomal rna , phylogenetic tree , mycelium , taxonomy (biology) , microbiology and biotechnology , bacteria , genetics , gene
A novel actinomycete, designated strain YIM 67092(T), was isolated from rhizosphere soil of the perennial vine Tripterygium wilfordii Hook. f. collected from Yunnan province, South-west China. The strain formed well differentiated aerial and substrate mycelia and grew in the presence of up to 7 % (w/v) NaCl. Phylogenetic analysis based on the 16S rRNA gene showed that strain YIM 67092(T) belonged to the genus Nonomuraea, with highest sequence similarity to Nonomuraea rosea GW 12687(T) (99.0 %). Sequence similarities between strain YIM 67092(T) and other species of the genus Nonomuraea ranged from 97.8 % (Nonomuraea dietziae DSM 44320(T)) to 93.8 % (Nonomuraea kuesteri GW 14-1925(T)). Key morphological, physiological and chemotaxonomic characteristics of strain YIM 67092(T) were congruent with the description of the genus Nonomuraea. The G+C content of the genomic DNA was 69.3 mol%. Based on comparative analysis of physiological, biochemical and chemotaxonomic data, including low DNA-DNA hybridization results, strain YIM 67092(T) represents a novel species of the genus Nonomuraea, for which the name Nonomuraea rhizophila sp. nov. is proposed. The type strain is YIM 67092(T) ( = CCTCC AA 209044(T) = DSM 45382(T)).
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