Demequina activiva sp. nov., isolated from a tidal flat
Author(s) -
Sooyeon Park,
Yong-Taek Jung,
SungMin Won,
JungSook Lee,
JungHoon Yoon
Publication year - 2015
Publication title -
international journal of systematic and evolutionary microbiology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.925
H-Index - 173
eISSN - 1466-5034
pISSN - 1466-5026
DOI - 10.1099/ijs.0.000217
Subject(s) - biology , 16s ribosomal rna , phylogenetic tree , strain (injury) , genus , peptidoglycan , tidal flat , ribosomal rna , bacteria , microbiology and biotechnology , botany , gene , genetics , anatomy , sediment , paleontology
A Gram-stain-positive, facultatively anaerobic, non-spore-forming, non-flagellated and rod-shaped or ovoid bacterial strain, designated BS-12M(T), was isolated from a tidal flat sediment on the South Sea, South Korea. Strain BS-12M(T) grew optimally at 35 °C, at pH 7.0-8.0 and in the presence of 2.0% (w/v) NaCl. The neighbour-joining phylogenetic tree based on 16S rRNA gene sequences revealed that strain BS-12M(T) fell within the cluster comprising the type strains of species of the genus Demequina, joining the type strain of Demequina aestuarii with which it shared the highest sequence similarity (98.6%). It exhibited 16S rRNA gene sequence similarity of 96.1-97.9% to the type strains of other species of the genus Demequina. The peptidoglycan type of strain BS-12M(T) was A4β based on L-Orn -L-Ser -D-Glu. Strain BS-12M(T) contained demethylmenaquinone-9(H4) as the major menaquinone and anteiso-C15:0 and C16:0 as the major fatty acids. The major polar lipids of strain BS-12M(T) were phosphatidylinositol and phosphatidylinositolmannoside. The DNA G+C content of strain BS-12M(T) was 70.7 mol% and its DNA-DNA relatedness values with the type strains of five phylogenetically related species of the genus Demequina were 15-34%. Differential phenotypic properties, together with phylogenetic and genetic distinctiveness, revealed that strain BS-12M(T) is separate from other species of the genus Demequina. On the basis of the data presented, strain BS-12M(T) is considered to represent a novel species of the genus Demequina, for which the name Demequina activiva sp. nov. is proposed. The type strain is BS-12M(T) ( =KCTC 29674(T) = NBRC 110675T).
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