A minimal view of single-particle imaging with X-ray lasers
Author(s) -
N. Duane Loh
Publication year - 2014
Publication title -
philosophical transactions of the royal society b biological sciences
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 2.753
H-Index - 272
eISSN - 1471-2970
pISSN - 0962-8436
DOI - 10.1098/rstb.2013.0328
Subject(s) - femtosecond , computer science , biomolecule , workflow , laser , maximization , algorithm , simple (philosophy) , diffraction , phaser , optics , biological system , physics , nanotechnology , materials science , mathematics , mathematical optimization , biology , philosophy , epistemology , database
The ability to serially interrogate single biomolecules with femtosecond X-ray pulses from free-electron lasers has ushered in the possibility of determining the three-dimensional structure of biomolecules without crystallization. However, the complexity of imaging a sample's structure from very many of its noisy and incomplete diffraction data can be daunting. In this review, we introduce a simple analogue of this imaging workflow, use it to describe a structure reconstruction algorithm based on the expectation maximization principle, and consider the effects of extraneous noise. Such a minimal model can aid experiment and algorithm design in future studies.
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