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Molecular ping-pong Game of Life on a two-dimensional DNA origami array
Author(s) -
Natas̆a Jonoska,
Nadrian C. Seeman
Publication year - 2015
Publication title -
philosophical transactions of the royal society a mathematical physical and engineering sciences
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 1.074
H-Index - 169
eISSN - 1471-2962
pISSN - 1364-503X
DOI - 10.1098/rsta.2014.0215
Subject(s) - dna origami , molecular dynamics , cellular automaton , computer science , nanotechnology , dna , molecular motor , molecular communication , biological system , topology (electrical circuits) , physics , materials science , chemistry , biology , engineering , algorithm , nanostructure , biochemistry , quantum mechanics , computer network , transmitter , channel (broadcasting) , electrical engineering
We propose a design for programmed molecular interactions that continuously change molecular arrangements in a predesigned manner. We introduce a model where environmental control through laser illumination allows platform attachment/detachment oscillations between two floating molecular species. The platform is a two-dimensional DNA origami array of tiles decorated with strands that provide both, the floating molecular tiles to attach and to pass communicating signals to neighbouring array tiles. In particular, we show how algorithmic molecular interactions can control cyclic molecular arrangements by exhibiting a system that can simulate the dynamics similar to two-dimensional cellular automata on a DNA origami array platform.

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