A51 Rubella genotype 1H is still circulating in Turkey
Author(s) -
Tülay Yalçınkaya
Publication year - 2018
Publication title -
virus evolution
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 2.231
H-Index - 23
ISSN - 2057-1577
DOI - 10.1093/ve/vey010.050
Subject(s) - rubella , genotype , medicine , virology , biology , vaccination , measles , genetics , gene
tection of the fragments of ORF K1 of HHV-8, which were then genotyped and analyzed regarding the genetic variability. Our study described 106 positive cases for HHV-8 in the saliva from 751 AIDS patients without previous KS. In addition, we performed a phylogenetic analysis of HHV-8 in 34 of the 106 AIDS patients without KS and in 33 of the 37 patients with active KS. The distribution of HHV-8 genotypes A, B, C, and F in AIDS individuals was indistinguishable by comparing non-KS and KS groups, as well as regarding ethnicity. Considering the KS group, genotype B was associated with better prognosis of KS tumor. Interestingly, we found a particular profile of diversity within clade C and two recombinant patterns of HHV-8 in the saliva of AIDS individuals without KS. We emphasize the need to achieve standard genotyping protocol for ORF K1 amplification, thus allowing for substantial detection of HHV-8 variants. Our findings can shed light on the role of HHV-8 variability in the pathogenesis of AIDS-KS. Our perspective is study polymorphisms and phylogenetic inferences in HHV-8 sequences encoding microRNA.
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