Crystallographic studies of Homo sapiens ribosomal decoding A site complexed with aminoglycosides
Author(s) -
Jiro Kondo,
Boris François,
Alexandre Urzhumtsev,
Éric Westhof
Publication year - 2005
Publication title -
nucleic acids symposium series
Language(s) - English
Resource type - Journals
eISSN - 1746-8272
pISSN - 0261-3166
DOI - 10.1093/nass/49.1.253
Subject(s) - homo sapiens , ribosomal rna , ribosome , binding site , aminoglycoside , transfer rna , biology , genetics , chemistry , computational biology , rna , antibiotics , gene , geography , archaeology
Aminoglycosides are highly effective antibacterial drugs that decrease translation accuracy by binding to the aminoacyl-tRNA decoding site (A site) of 16S ribosomal RNA. On the other hand, they are highly toxic to mammals through kidney and ear-associated illnesses by binding to ribosomal A sites. To understand the mechanism of toxicity of aminoglycosides to mammals at atomic level, crystallographic studies have been carried out with a number of Homo sapiens mitochondrial and cytoplasmic A sites complexed with aminoglycosides. Several X-ray diffraction data sets were successfully collected. Initial phases of mitochondrial A site with tobramycin and cytoplasmic A site with paromomycin were derived by the molecular replacement method. Refinements of atomic parameters are now under progress.
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