W-IQ-TREE: a fast online phylogenetic tool for maximum likelihood analysis | Zendy

Jana Trifinopoulos | Zendy; Lam-Tung Nguyen | Zendy; Arndt von Haeseler | Zendy; Bùi Quang Minh | Zendy

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W-IQ-TREE: a fast online phylogenetic tool for maximum likelihood analysis

Author(s) -

Jana Trifinopoulos,

Lam-Tung Nguyen,

Arndt von Haeseler,

Bùi Quang Minh

Publication year - 2016

Publication title -

nucleic acids research

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 9.008

H-Index - 537

eISSN - 1362-4954

pISSN - 0305-1048

DOI - 10.1093/nar/gkw256

Subject(s) - phylogenetic tree , tree (set theory) , biology , bootstrapping (finance) , range tree , tree rearrangement , computer science , partition (number theory) , interval tree , binary tree , theoretical computer science , tree structure , algorithm , genetics , mathematics , combinatorics , gene , econometrics

This article presents W-IQ-TREE, an intuitive and user-friendly web interface and server for IQ-TREE, an efficient phylogenetic software for maximum likelihood analysis. W-IQ-TREE supports multiple sequence types (DNA, protein, codon, binary and morphology) in common alignment formats and a wide range of evolutionary models including mixture and partition models. W-IQ-TREE performs fast model selection, partition scheme finding, efficient tree reconstruction, ultrafast bootstrapping, branch tests, and tree topology tests. All computations are conducted on a dedicated computer cluster and the users receive the results via URL or email. W-IQ-TREE is available at http://iqtree.cibiv.univie.ac.at It is free and open to all users and there is no login requirement.

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