metaSHARK: a WWW platform for interactive exploration of metabolic networks | Zendy

Christopher J. T. Hyland | Zendy; John W. Pinney | Zendy; Glenn A. McConkey | Zendy; David R. Westhead | Zendy

AI Assistant Blog Pricing

Home ZAIA Blog

Open Access

metaSHARK: a WWW platform for interactive exploration of metabolic networks

Author(s) -

Christopher J. T. Hyland,

John W. Pinney,

Glenn A. McConkey,

David R. Westhead

Publication year - 2006

Publication title -

nucleic acids research

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 9.008

H-Index - 537

eISSN - 1362-4954

pISSN - 0305-1048

DOI - 10.1093/nar/gkl196

Subject(s) - upload , biology , kegg , metabolic network , context (archaeology) , visualization , the internet , web browser , genome browser , computational biology , genome , world wide web , web server , gene , bioinformatics , computer science , genomics , gene expression , transcriptome , genetics , data mining , paleontology

The metaSHARK (metabolic search and reconstruction kit) web server offers users an intuitive, fully interactive way to explore the KEGG metabolic network via a WWW browser. Metabolic reconstruction information for specific organisms, produced by our automated SHARKhunt tool or from other programs or genome annotations, may be uploaded to the website and overlaid on the generic network. Additional data from gene expression experiments can also be incorporated, allowing the visualization of differential gene expression in the context of the predicted metabolic network. metaSHARK is available at http://bioinformatics.leeds.ac.uk/shark/.

The content you want is available to Zendy users.

Already have an account? Click here to sign in.

Having issues? You can contact us here

Accelerating Research