Dry-reagent disposable dipstick test for visual screening of seven leukemia-related chromosomal translocations
Author(s) -
Despina P. Kalogianni,
Vasiliki Bravou,
Theodore K. Christopoulos,
Penelope C. Ioannou,
N. Zoumbos
Publication year - 2007
Publication title -
nucleic acids research
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 9.008
H-Index - 537
eISSN - 1362-4954
pISSN - 0305-1048
DOI - 10.1093/nar/gkl1097
Subject(s) - microbiology and biotechnology , dipstick , biology , biotinylation , chromosomal translocation , streptavidin , amplicon , primer (cosmetics) , polymerase chain reaction , multiplex , gene , genetics , biochemistry , chemistry , biotin , urine , organic chemistry
We report the first dry-reagent, disposable, dipstick test for molecular screening of seven chromosomal translocations associated with acute and chronic leukemia. The dipstick assay offers about 10 times higher detectability than agarose gel electropho- resis and, contrary to electrophoresis, allows con- firmation of the sequence of the polymerase chain reaction (PCR) product by hybridization within a few minutes without the need of instrumentation. Biotinylated amplified DNA is hybridized with a dA- tailed probe and applied to the strip, which contains oligo(dT)-conjugated gold nanoparticles in dry form. Upon immersion of the strip in the appropriate buffer, the solution migrates and the hybrids are captured by immobilized streptavidin at the test zone generating a characteristic red line. The excess nanoparticles are captured by oligo(dA) strands immobilized at the control zone of the strip producing a second red line. We studied the: t(9;22)(q34;q11), t(15;17)(q22;q21), t(11;17)(q23;q21), t(5;17)(q32;q21), t(11;17)(q13;q21), t(8,21)(q22;q22) and inv(16)(p13;q22) that generate the BCR-ABL, PML-RARa, PLZF-RARa, NPM-RARa, NuMA-RARa, AML1-ETO and CBFb-MYH11 fusion genes, respectively. A single K562 cell was detectable amidst 106 normal leukocytes. A dipstick test was developed for actin, as a reference gene. The dipstick assay with appropriate probes can be used for identification of the fusion transcripts involved in the translocation.
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