SCRATCH: a protein structure and structural feature prediction server | Zendy

Jianlin Cheng | Zendy; Arlo Randall | Zendy; Michael J. Sweredoski | Zendy; Pierre Baldi | Zendy

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SCRATCH: a protein structure and structural feature prediction server

Author(s) -

Jianlin Cheng,

Arlo Randall,

Michael J. Sweredoski,

Pierre Baldi

Publication year - 2005

Publication title -

nucleic acids research

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 9.008

H-Index - 537

eISSN - 1362-4954

pISSN - 0305-1048

DOI - 10.1093/nar/gki396

Subject(s) - scratch , biology , protein tertiary structure , server , web server , suite , software , protein structure prediction , peptide sequence , protein structure , computational biology , bioinformatics , operating system , computer science , genetics , the internet , biochemistry , history , archaeology , gene

SCRATCH is a server for predicting protein tertiary structure and structural features. The SCRATCH software suite includes predictors for secondary structure, relative solvent accessibility, disordered regions, domains, disulfide bridges, single mutation stability, residue contacts versus average, individual residue contacts and tertiary structure. The user simply provides an amino acid sequence and selects the desired predictions, then submits to the server. Results are emailed to the user. The server is available at http://www.igb.uci.edu/servers/psss.html.

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