RPG: the Ribosomal Protein Gene database | Zendy

Akihiro Nakao | Zendy

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RPG: the Ribosomal Protein Gene database

Author(s) -

Akihiro Nakao

Publication year - 2003

Publication title -

nucleic acids research

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 9.008

H-Index - 537

eISSN - 1362-4954

pISSN - 0305-1048

DOI - 10.1093/nar/gkh004

Subject(s) - biology , intron , gene , genetics , ribosomal protein , ribosome , exon , methanococcus , caenorhabditis elegans , small nucleolar rna , genome , computational biology , database , escherichia coli , rna , non coding rna , computer science

RPG (http://ribosome.miyazaki-med.ac.jp/) is a new database that provides detailed information about ribosomal protein (RP) genes. It contains data from humans and other organisms, including Drosophila melanogaster, Caenorhabditis elegans, Saccharo myces cerevisiae, Methanococcus jannaschii and Escherichia coli. Users can search the database by gene name and organism. Each record includes sequences (genomic, cDNA and amino acid sequences), intron/exon structures, genomic locations and information about orthologs. In addition, users can view and compare the gene structures of the above organisms and make multiple amino acid sequence alignments. RPG also provides information on small nucleolar RNAs (snoRNAs) that are encoded in the introns of RP genes.

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