The Stanford Microarray Database: data access and quality assessment tools | Zendy

Jeremy Gollub | Zendy

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The Stanford Microarray Database: data access and quality assessment tools

Author(s) -

Jeremy Gollub

Publication year - 2003

Publication title -

nucleic acids research

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 9.008

H-Index - 537

eISSN - 1362-4954

pISSN - 0305-1048

DOI - 10.1093/nar/gkg078

Subject(s) - microarray databases , database , microarray analysis techniques , data quality , data access , biology , data science , computer science , engineering , metric (unit) , genetics , operations management , gene , gene expression

The Stanford Microarray Database (SMD; http://genome-www.stanford.edu/microarray/) serves as a microarray research database for Stanford investigators and their collaborators. In addition, SMD functions as a resource for the entire scientific community, by making freely available all of its source code and providing full public access to data published by SMD users, along with many tools to explore and analyze those data. SMD currently provides public access to data from 3500 microarrays, including data from 85 publications, and this total is increasing rapidly. In this article, we describe some of SMD's newer tools for accessing public data, assessing data quality and for data analysis.

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