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RCSB Protein Data Bank: powerful new tools for exploring 3D structures of biological macromolecules for basic and applied research and education in fundamental biology, biomedicine, biotechnology, bioengineering and energy sciences
Author(s) -
S.K. Burley,
Charmi Bhikadiya,
Chunxiao Bi,
Sebastian Bittrich,
Li Chen,
G.V. Crichlow,
Cole Christie,
Kenneth Dalenberg,
Luigi Di Costanzo,
José M. Duarte,
Shuchismita Dutta,
Zukang Feng,
Sai J. Ganesan,
David S. Goodsell,
Sutapa Ghosh,
Rachel Kramer Green,
Vladimir Guranović,
Dmytro Guzenko,
Brian P. Hudson,
Catherine L. Lawson,
YuHe Liang,
Robert Lowe,
Harry Namkoong,
Ezra Peisach,
Irina Persikova,
Chris Randle,
Alexander Rose,
Yana Rose,
Andrej Šali,
Joan Segura,
Monica Sekharan,
Chenghua Shao,
YiPing Tao,
Maria Voigt,
John D. Westbrook,
Jasmine Young,
Christine Zardecki,
Marina A. Zhuravleva
Publication year - 2020
Publication title -
nucleic acids research
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 9.008
H-Index - 537
eISSN - 1362-4954
pISSN - 0305-1048
DOI - 10.1093/nar/gkaa1038
Subject(s) - protein data bank (rcsb pdb) , protein data bank , collaboratory , structural bioinformatics , data curation , biology , biomedicine , world wide web , bioinformatics , computer science , protein structure , biochemistry
The Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB PDB), the US data center for the global PDB archive and a founding member of the Worldwide Protein Data Bank partnership, serves tens of thousands of data depositors in the Americas and Oceania and makes 3D macromolecular structure data available at no charge and without restrictions to millions of RCSB.org users around the world, including >660 000 educators, students and members of the curious public using PDB101.RCSB.org. PDB data depositors include structural biologists using macromolecular crystallography, nuclear magnetic resonance spectroscopy, 3D electron microscopy and micro-electron diffraction. PDB data consumers accessing our web portals include researchers, educators and students studying fundamental biology, biomedicine, biotechnology, bioengineering and energy sciences. During the past 2 years, the research-focused RCSB PDB web portal (RCSB.org) has undergone a complete redesign, enabling improved searching with full Boolean operator logic and more facile access to PDB data integrated with >40 external biodata resources. New features and resources are described in detail using examples that showcase recently released structures of SARS-CoV-2 proteins and host cell proteins relevant to understanding and addressing the COVID-19 global pandemic.

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