ASDB: database of alternatively spliced genes | Zendy

Mikhail S. Gelfand | Zendy; Inna Dubchak | Zendy; I. Dralyuk | Zendy; Manfred Zorn | Zendy

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ASDB: database of alternatively spliced genes

Author(s) -

Mikhail S. Gelfand,

Inna Dubchak,

I. Dralyuk,

Manfred Zorn

Publication year - 1999

Publication title -

nucleic acids research

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 9.008

H-Index - 537

eISSN - 1362-4954

pISSN - 0305-1048

DOI - 10.1093/nar/27.1.301

Subject(s) - biology , gene , rna splicing , alternative splicing , genetics , computational biology , database , trans splicing , organism , rna , messenger rna , computer science

A database of alternatively spliced genes (ASDB) has been constructed based on (i) the results of the analysis of Swiss-Prot entries containing products of these genes and (ii) clustering procedure joining proteins that could arise by alternative splicing of the same gene. ASDB incorporates information about alternatively spliced genes, their products and expression patterns. It can be searched in order to find all products of alternative splicing produced in a particular tissue or a given organism, or all variants generated by a particular transcript. ASDB currently contains about 1700 protein sequences and can be accessed via the Internet at URL http://cbcg.nersc.gov/asdb

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