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Oligoribonucleotide circularization by 'template-mediated' ligation with T4 RNA ligase: Synthesis of circular hammerhead ribozymes
Author(s) -
Linlin Wang,
Duane E. Ruffner
Publication year - 1998
Publication title -
nucleic acids research
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 9.008
H-Index - 537
eISSN - 1362-4954
pISSN - 0305-1048
DOI - 10.1093/nar/26.10.2502
Subject(s) - ribozyme , ligase ribozyme , hammerhead ribozyme , biology , rna ligase , dna ligase , ligation , rna , dna , microbiology and biotechnology , hairpin ribozyme , biochemistry , gene
Circular hammerhead ribozymes were synthesized from linear oligoribonucleotides using T4 RNA ligase. Some of the precursors could not be efficiently circularized under standard conditions. For these molecules, the use of a DNA template allowed their efficient circularization. The template was designed to prevent the precursor from folding into an unsuitable structure. The template allowed circular ribozymes as small as 15 nucleotides in length to be efficiently synthesized at concentrations as high as 50 microM in the ligation reaction. The circular products retained their biological activity.

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