Population Variation Revealed High-Altitude Adaptation of Tibetan Mastiffs
Author(s) -
Yàn Li,
DongDong Wu,
Adam R. Boyko,
Guodong Wang,
ShiFang Wu,
David M. Irwin,
YaPing Zhang
Publication year - 2014
Publication title -
molecular biology and evolution
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 6.637
H-Index - 218
eISSN - 1537-1719
pISSN - 0737-4038
DOI - 10.1093/molbev/msu070
Subject(s) - biology , adaptation (eye) , single nucleotide polymorphism , nucleotide diversity , evolutionary biology , genetic diversity , genetic variation , population , genetics , gene , balancing selection , haplotype , genotype , demography , neuroscience , sociology
With the assistance of their human companions, dogs have dispersed into new environments during the expansion of human civilization. Tibetan Mastiff (TM), a native of the Tibetan Plateau, was derived from the domesticated Chinese native dog and, like Tibetans, has adapted to the extreme environment of high altitude. Here, we genotyped genome-wide single-nucleotide polymorphisms (SNPs) from 32 TMs and compared them with SNPs from 20 Chinese native dogs and 14 gray wolves (Canis lupus). We identified 16 genes with signals of positive selection in the TM, with 12 of these candidate genes associated with functions that have roles in adaptation to high-altitude adaptation, such as EPAS1, SIRT7, PLXNA4, and MAFG that have roles in responses to hypoxia. This study provides important information on the genetic diversity of the TM and potential mechanisms for adaptation to hypoxia.
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