TetraploidMap for Windows: Linkage Map Construction and QTL Mapping in Autotetraploid Species | Zendy

Christine A. Hackett | Zendy; Iain Milne | Zendy; John E. Bradshaw | Zendy; Zewei Luo | Zendy

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TetraploidMap for Windows: Linkage Map Construction and QTL Mapping in Autotetraploid Species

Author(s) -

Christine A. Hackett,

Iain Milne,

John E. Bradshaw,

Zewei Luo

Publication year - 2007

Publication title -

journal of heredity

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 0.99

H-Index - 92

eISSN - 1471-8505

pISSN - 0022-1503

DOI - 10.1093/jhered/esm086

Subject(s) - quantitative trait locus , biology , linkage (software) , locus (genetics) , software , genetic linkage , permutation (music) , genetics , computer science , operating system , gene , physics , acoustics

An earlier program, TetraploidMap, enabled linkage analysis to be performed for autotetraploid species, with a text-based input and output. The current program, TetraploidMap for Windows, is considerably enhanced, and now goes beyond linkage analysis to perform quantitative trait locus (QTL) interval mapping, with a range of models and thresholds assessed by permutation tests. A Windows-based interface facilitates data entry and exploration. TetraploidMap for Windows is freely available from the Web site of Bioinformatics and Statistics Scotland at http://www.bioss.ac.uk/ (user-friendly software).

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