Linkage of Hospital Records and Death Certificates by a Search Engine and Machine Learning
Author(s) -
Sébastien Cossin,
Serigne Diouf,
Romain Griffier,
Philippine Le Barrois d’Orgeval,
Gayo Diallo,
Vianney Jouhet
Publication year - 2021
Publication title -
jamia open
Language(s) - English
Resource type - Journals
ISSN - 2574-2531
DOI - 10.1093/jamiaopen/ooab005
Subject(s) - death certificate , record linkage , medical record , linkage (software) , computer science , database , pipeline (software) , certificate , medicine , medical emergency , cause of death , operating system , population , biochemistry , chemistry , disease , environmental health , pathology , gene , radiology , algorithm
Vital status is of central importance to hospital clinical research. However, hospital information systems record only in-hospital death information. Recently, the French government released a publicly available dataset containing death-certificate data for over 25 million individuals. The objective of this study was to link French death certificates to the Bordeaux University Hospital records to complete the vital status information. Materials and Methods Our linkage strategy was composed of a search engine to reduce the number of comparisons and machine-learning algorithms. The overall pipeline was evaluated by assembling a file containing 3,565 in-hospital deaths and 15,000 alive persons. Results The recall and precision of our linkage strategy were 97.5% and 99.97% for the upper threshold and 99.4% and 98.9% for the lower threshold, respectively. Conclusion In this study, we demonstrated the feasibility of accurately linking hospital records with death certificates using a search engine and machine learning.
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