A probabilistic multi-omics data matching method for detecting sample errors in integrative analysis
Author(s) -
Eunjee Lee,
Seungyeul Yoo,
Wenhui Wang,
Zhidong Tu,
Jun Zhu
Publication year - 2019
Publication title -
gigascience
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 2.947
H-Index - 54
ISSN - 2047-217X
DOI - 10.1093/gigascience/giz080
Subject(s) - computer science , data mining , sample (material) , probabilistic logic , matching (statistics) , omics , statistical power , sample size determination , annotation , computational biology , bioinformatics , artificial intelligence , statistics , biology , mathematics , chemistry , chromatography
Data errors, including sample swapping and mis-labeling, are inevitable in the process of large-scale omics data generation. Data errors need to be identified and corrected before integrative data analyses where different types of data are merged on the basis of the annotated labels. Data with labeling errors dampen true biological signals. More importantly, data analysis with sample errors could lead to wrong scientific conclusions. We developed a robust probabilistic multi-omics data matching procedure, proMODMatcher, to curate data and identify and correct data annotation and errors in large databases.
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