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Gigwa v2—Extended and improved genotype investigator
Author(s) -
Guilhem Sempéré,
Adrien Pétel,
Mathieu Rouard,
Julien Frouin,
Yann Hueber,
Fabien De Bellis,
Pierre Larmande
Publication year - 2019
Publication title -
gigascience
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 2.947
H-Index - 54
ISSN - 2047-217X
DOI - 10.1093/gigascience/giz051
Subject(s) - computer science , scalability , visualization , data science , web application , data visualization , population , software , genotyping , data management , data mining , world wide web , information retrieval , database , genotype , demography , sociology , programming language , biochemistry , chemistry , gene
The study of genetic variations is the basis of many research domains in biology. From genome structure to population dynamics, many applications involve the use of genetic variants. The advent of next-generation sequencing technologies led to such a flood of data that the daily work of scientists is often more focused on data management than data analysis. This mass of genotyping data poses several computational challenges in terms of storage, search, sharing, analysis, and visualization. While existing tools try to solve these challenges, few of them offer a comprehensive and scalable solution.

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