Long-read sequencing and de novo genome assembly of Ammopiptanthus nanus, a desert shrub | Zendy

Fei Gao | Zendy; Xue Wang | Zendy; Xuming Li | Zendy; Mingyue Xu | Zendy; Huayun Li | Zendy; Merhaba Abla | Zendy; Huigai Sun | Zendy; Shanjun Wei | Zendy; Jinchao Feng | Zendy; Yijun Zhou | Zendy

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Long-read sequencing and de novo genome assembly of Ammopiptanthus nanus, a desert shrub

Author(s) -

Fei Gao,

Xue Wang,

Xuming Li,

Mingyue Xu,

Huayun Li,

Merhaba Abla,

Huigai Sun,

Shanjun Wei,

Jinchao Feng,

Yijun Zhou

Publication year - 2018

Publication title -

gigascience

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 2.947

H-Index - 54

ISSN - 2047-217X

DOI - 10.1093/gigascience/giy074

Subject(s) - biology , sequence assembly , genome , phylogenetic tree , contig , genetics , genomics , whole genome sequencing , gene , metagenomics , evolutionary biology , computational biology , transcriptome , gene expression

Ammopiptanthus nanus is a rare broad-leaved shrub that is found in the desert and arid regions of Central Asia. This plant species exhibits extremely high tolerance to drought and freezing and has been used in abiotic tolerance research in plants. As a relic of the tertiary period, A. nanus is of great significance to plant biogeographic research in the ancient Mediterranean region. Here, we report a draft genome assembly using the Pacific Biosciences (PacBio) platform and gene annotation for A. nanus.

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