Single-molecule sequencing and optical mapping yields an improved genome of woodland strawberry (Fragaria vesca) with chromosome-scale contiguity | Zendy

Patrick P. Edger | Zendy; Robert VanBuren | Zendy; Marivi Colle | Zendy; Thomas J. Poorten | Zendy; Ching Man Wai | Zendy; Chad E. Niederhuth | Zendy; Elizabeth I. Alger | Zendy; Shujun Ou | Zendy; Charlotte B. Acharya | Zendy; Jie Wang | Zendy; Pete Callow | Zendy; Michael R. McKain | Zendy; Jinghua Shi | Zendy; Chad C. Collier | Zendy; Zhiyong Xiong | Zendy; Jeffrey P. Mower | Zendy; Janet P. Slovin | Zendy; Timo Hytönen | Zendy; Ning Jiang | Zendy; Kevin L. Childs | Zendy; Steven J. Knapp | Zendy

Open Access

Single-molecule sequencing and optical mapping yields an improved genome of woodland strawberry (Fragaria vesca) with chromosome-scale contiguity

Author(s) -

Patrick P. Edger,

Robert VanBuren,

Marivi Colle,

Thomas J. Poorten,

Ching Man Wai,

Chad E. Niederhuth,

Elizabeth I. Alger,

Shujun Ou,

Charlotte B. Acharya,

Jie Wang,

Pete Callow,

Michael R. McKain,

Jinghua Shi,

Chad C. Collier,

Zhiyong Xiong,

Jeffrey P. Mower,

Janet P. Slovin,

Timo Hytönen,

Ning Jiang,

Kevin L. Childs,

Steven J. Knapp

Publication year - 2017

Publication title -

gigascience

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 2.947

H-Index - 54

ISSN - 2047-217X

DOI - 10.1093/gigascience/gix124

Subject(s) - fragaria , contiguity , woodland , genome , scale (ratio) , biology , computational biology , chromosome , genetics , botany , gene , ecology , geography , cartography

Although draft genomes are available for most agronomically important plant species, the majority are incomplete, highly fragmented, and often riddled with assembly and scaffolding errors. These assembly issues hinder advances in tool development for functional genomics and systems biology.

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